Journal Articles 2008

[1] Ainsworth, TD, Fine, M, Roff, G and Hoegh-Guldberg, O (2008). Bacteria are not the primary cause of bleaching in the mediterranean coral oculina patagonica. ISME Journal 2(1): 67-73.
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[2] Ainsworth, TD and Hoegh-Guldberg, O (2008). Cellular processes of bleaching in the mediterranean coral oculina patagonica. Coral Reefs 27(3): 593-597.
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[3] Ainsworth, TD, Hoegh-Guldberg, O, Heron, SF, Skirving, WJ and Leggat, W (2008). Early cellular changes are indicators of pre-bleaching thermal stress in the coral host. Journal of Experimental Marine Biology and Ecology 364(2): 63-71.
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[4] Al-Habsi, SH, Sweeting, CJ, Polunin, NVC and Graham, NAJ (2008). Delta;15n and delta;13c elucidation of size-structured food webs in a western arabian sea demersal trawl assemblage. Marine Ecology Progress Series 353: 55-63.
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[5] Alieva, NO, Konzen, KA, Field, SF, Meleshkevitch, EA, Hunt, ME, Beltran-Ramirez, V, Miller, DJ, Wiedenmann, Jr, Salih, A and Matz, MV (2008). Diversity and evolution of coral fluorescent proteins. PLoS ONE 3(7): e2680.
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[6] Andersen, MB, Stirling, CH, Potter, E-K, Halliday, AN, Blake, SG, McCulloch, MT, Ayling, BF and O'Leary, M (2008). High-precision u-series measurements of more than 500,000 year old fossil corals. Earth and Planetary Science Letters 265(1-2): 229-245.
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[7] Baird, A (2008). Coral adaptation in the face of climate change. Science 320: 315-316.
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[8] Baird, A and Kerr, A (2008). Landscape analysis and tsunami damage in aceh: Comment on iverson and prasad (2007). Landscape Ecology 23(1): 3-5.
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[9] Daley, B, Griggs, P and Marsh, H (2008). Exploiting marine wildlife in queensland: The commercial dugong and marine turtle fisheries, 1847–1969. Australian Economic History Review 48(3): 227-265.
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[10] Berumen, M and Pratchett, M (2008). Trade-offs associated with dietary specialization in corallivorous butterflyfishes (chaetodontidae: Chaetodon ). Behavioral Ecology and Sociobiology 62(6): 989-994.
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[11] Birrell, C, McCook, L, Willis, B and Diaz-Pulido, G (2008). Effects of benthic algae on the replenishment of corals and the implications for the resilience of coral reefs. Oceanography and Marine Biology 46: 25-65.

[12] Birrell, CL, McCook, LJ, Willis, BL and Harrington, L (2008). Chemical effects of macroalgae on larval settlement of the broadcast spawning coral acropora millepora. Marine Ecology Progress Series 362: 129-137.
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[13] Bourne, DG, Boyett, HV, Henderson, ME, Muirhead, A and Willis, BL (2008). Identification of a ciliate (oligohymenophorea: Scuticociliatia) associated with brown band disease on corals of the great barrier reef. Applied and Environmental Microbiology 74(3): 883-888.
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[14] Carpenter, KE, Abrar, M, Aeby, G, Aronson, RB, Banks, S, Bruckner, A, Chiriboga, A, Cortes, J, Delbeek, JC, DeVantier, L, Edgar, GJ, Edwards, AJ, Fenner, D, Guzman, HM, Hoeksema, BW, Hodgson, G, Johan, O, Licuanan, WY, Livingstone, SR, Lovell, ER, Moore, JA, Obura, DO, Ochavillo, D, Polidoro, BA, Precht, WF, Quibilan, MC, Reboton, C, Richards, ZT, Rogers, AD, Sanciangco, J, Sheppard, A, Sheppard, C, Smith, J, Stuart, S, Turak, E, Veron, JEN, Wallace, C, Weil, E and Wood, E (2008). One-third of reef-building corals face elevated extinction risk from climate change and local impacts. Science 321(5888): 560-563.
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[15] Cole, AJ, Pratchett, MS and Jones, GP (2008). Diversity and functional importance of coral-feeding fishes on tropical coral reefs. Fish and Fisheries 9: 286-307.
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[17] Cooper, TF, De 'Ath, G, Fabricius, KE and Lough, JM (2008). Declining coral calcification in massive porites in two nearshore regions of the northern great barrier reef. Global Change Biology 14(3): 529-538.
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[18] Cornell, H, Karlson, R and Hughes, T (2008). Local-regional species richness relationships are linear at very small to large scales in west-central pacific corals. Coral Reefs 27(1): 145-151.
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[19] Diaz-Pulido, G (2008). Macroalgae: A field guide to the great barrier reef. In The great barrier reef: Biology, environment and management. P. Hutchings, M. Kingsford and O. Hoegh-Guldberg (Eds.). CSIRO, Australia.
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[20] Dinsdale, EA, Pantos, O, Smriga, S, Edwards, RA, Angly, F, Wegley, L, Hatay, M, Hall, D, Brown, E, Haynes, M, Krause, L, Sala, E, Sandin, SA, Thurber, RV, Willis, BL, Azam, F, Knowlton, N and Rohwer, F (2008). Microbial ecology of four coral atolls in the northern line islands. PLoS ONE 3(2): e1584.
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[21] Eckes, MJ, Siebeck, UE, Dove, S and Grutter, AS (2008). Ultraviolet sunscreens in reef fish mucus. Marine Ecology Progress Series 353: 203-211.
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[22] Evans, RD, Russ, GR and Kritzer, JP (2008). Batch fecundity of lutjanus carponotatus (lutjanidae) and implications of no-take marine reserves on the great barrier reef, australia. Coral Reefs 27(1): 179-189.
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[23] Ferguson, KH (2008). Submerged realities: Shark documentaries at depth. pp 107-122. In This watery world: Humans and the sea. V. P. Messier and N. Batra (Eds.). CEA-CC Publications, Mayaguez, Puerto Rico.
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[24] Foale, SJ (2008). Appraising the resilience of trochus and other nearshore artisanal fisheries in the western pacific. SPC Trochus Information Bulletin 14(1): 12-15.
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[25] Foale, SJ (2008). Conserving melanesia's coral reef heritage in the face of climate change. Historic Environment 21(1): 30-36.
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[26] Fox, R and Bellwood, D (2008). Direct versus indirect methods of quantifying herbivore grazing impact on a coral reef. Marine Biology 154(2): 325-334.
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[27] Fox, R and Bellwood, D (2008). Remote video bioassays reveal the potential feeding impact of the rabbitfish siganus canaliculatus (f: Siganidae) on an inner-shelf reef of the great barrier reef. Coral Reefs.
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[28] Gomez-Cabrera, MD, Ortiz, JC, Loh, WKW, Ward, S and Hoegh-Guldberg, O (2008). Acquisition of symbiotic dinoflagellates (symbiodinium) by juveniles of the coral acropora longicyathus. Coral Reefs 27(1): 219-226.
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[29] Graham, E, Baird, A and Connolly, S (2008). Survival dynamics of scleractinian coral larvae and implications for dispersal. Coral Reefs 27(3): 529-539.
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[30] Graham, NAJ, McClanahan, TR, MacNeil, MA, Wilson, SK, Polunin, NVC, Jennings, S, Chabanet, P, Clark, S, Spalding, MD, Letourneur, Y, Bigot, L, Galzin, R, Öhman, MC, Garpe, KC, Edwards, AJ and Sheppard, CRC (2008). Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems. PLoS ONE 3(8): e3039.
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[31] Gregson, M, Pratchett, M, Berumen, M and Goodman, B (2008). Relationships between butterflyfish (chaetodontidae) feeding rates and coral consumption on the great barrier reef. Coral Reefs 27(3): 583-591.
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[32] Grutter, A, Pickering, J, McCallum, H and McCormick, M (2008). Impact of micropredatory gnathiid isopods on young coral reef fishes. Coral Reefs 27(3): 655-661.
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[33] Halpern, BS, Walbridge, S, Selkoe, KA, Kappel, CV, Micheli, F, D'Agrosa, C, Bruno, JF, Casey, KS, Ebert, C, Fox, HE, Fujita, R, Heinemann, D, Lenihan, HS, Madin, EMP, Perry, MT, Selig, ER, Spalding, M, Steneck, R and Watson, R (2008). A global map of human impact on marine ecosystems. Science 319(5865): 948-952.
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[34] Harold, AS, Winterbottom, R, Munday, PL and Chapman, RW (2008). Phylogenetic relationships of indo-pacific coral gobies of the genus gobiodon (teleostei: Gobiidae), based on morphological and molecular data. Bulletin of Marine Science 82(1): 119-136.
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[35] Hill, R, Harding, EK, Edwards, D, O'Dempsey, J, Hill, D, Martin, A and McIntyre-Tamwoy, S (2008). A cultural and conservation economy for northern australia. 130 pp. Report for Land & Water Australia, Canberra.
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[36] Hoegh-Guldberg, O, Mumby, PJ, Hooten, AJ, Steneck, RS, Greenfield, P, Gomez, E, Harvell, DR, Sale, PF, Edwards, AJ, Caldeira, K, Knowlton, N, Eakin, CM, Iglesias-Prieto, R, Muthiga, N, Bradbury, RH, Dubi, A and Hatziolos, ME (2008). Coral adaptation in the face of climate change - response. Science 320(5874): 315-316.
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[37] Hoey, A and Bellwood, D (2008). Cross-shelf variation in the role of parrotfishes on the great barrier reef. Coral Reefs 27(1): 37-47.
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[38] Holmes, G, Ortiz, J, Kaniewska, P and Johnstone, R (2008). Using three-dimensional surface area to compare the growth of two pocilloporid coral species. Marine Biology 155(4): 421-427.
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[39] Hoogenboom, MO, Connolly, SR and Anthony, KRN (2008). Interactions between morphological and physiological plasticity optimize energy acquisition in corals. Ecology 89(4): 1144-1154.
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[40] Jones, AM, Berkelmans, R, van Oppen, MJH, Mieog, JC and Sinclair, W (2008). A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: Field evidence of acclimatization. Proceedings of the Royal Society B-Biological Sciences 275(1641): 1359-1365.
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[41] Jupiter, S and Marion, G (2008). Changes in forest area along stream networks in an agricultural catchment of the great barrier reef lagoon. Environmental Management.
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[42] Kingsford, MJ, Patterson, HM and Flood, MJ (2008). The influence of elemental chemistry on the widths of otolith increments in the neon damselfish (pomacentrus coelestis). Fisheries Bulletin 106(2): 135-142.
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[43] Kleypas, J and Hoegh-Guldberg, O (2008). Coral reefs and climate change: Susceptibility and consequences. pp 19-29. In Status of caribbean coral reefs after bleaching and hurricanes in 2005. C. Wilkinson and D. Souter (Eds.). Global Coral Reef Monitoring Network, and Reef and Rainforest Research Centre, Townsville.
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[44] Konow, N, Bellwood, DR, Wainwright, PC and Kerr, AM (2008). Evolution of novel jaw joints promote trophic diversity in coral reef fishes. Biological Journal of the Linnean Society 93(3): 545-555.
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[45] Lough, JM (2008). 10th anniversary review: A changing climate for coral reefs. Journal of Environmental Monitoring 10: 21-29.
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[46] Lough, JM (2008). Shifting climate zones for australia's tropical marine ecosystems. Geophysical Research Letters 35: 1-5.
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[47] Maynard, J, Anthony, K, Marshall, P and Masiri, I (2008). Major bleaching events can lead to increased thermal tolerance in corals. Marine Biology 155(2): 173-182.
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[48] Maynard, JA, Turner, PJ, Anthony, KRN, Baird, AH, Berkelmans, R, Eakin, M, Johnson, J, Marshall, PA, Packer, GR, Rea, A and Willis, BL (2008). Reeftemp: An interactive monitoring system for coral bleaching using high-resolution sst and improved stress predictors. Geophysical Research Letters 35(L05603).
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[49] McClanahan, TR, Cinner, JE, Maina, J, Graham, NAJ, Daw, TM, Stead, SM, Wamukota, A, Brown, K, Ateweberhan, M, Venus, V and Polunin, NVC (2008). Conservation action in a changing climate. Conservation Letters 1(2): 53-59.
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[50] McCormick, M and Manassa, R (2008). Predation risk assessment by olfactory and visual cues in a coral reef fish. Coral Reefs 27(1): 105-113.
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[51] McGregor, HV, Gagan, MK, McCulloch, MT, Hodge, E and Mortimer, G (2008). Mid-holocene variability in the marine 14c reservoir age for northern coastal papua new guinea. Quaternary Geochronology 3(3): 213-225.
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[52] McIntyre-Tamwoy, S (2008). The impact of global climate change and cultural heritage: Grasping the issues and defining the problem. Historic Environment 21(1): 2-9.
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[53] McIntyre-Tamwoy, S, White, B and Skeene, G (2008). Roger llewellyn dunmore cribb 1948-2007. Australian Aboriginal Studies 2008(1): 148-152.
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[54] Middlebrook, R, Hoegh-Guldberg, O and Leggat, W (2008). The effect of thermal history on the susceptibility of reef-building corals to thermal stress. Journal of Experimental Biology 211(7): 1050-1056.
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[55] Miller, DJ and Ball, EE (2008). Cryptic complexity captured:The nematostella genome reveals its secrets. Trends in Genetics 24(1): 1-4.
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[56] Moore, RB, Obornik, M, Janouskovec, J, Chrudimsky, T, Vancova, M, Green, DH, Wright, SW, Davies, NW, Bolch, CJS, Heimann, K, Slapeta, J, Hoegh-Guldberg, O, Logsdon, JM and Carter, DA (2008). A photosynthetic alveolate closely related to apicomplexan parasites. Nature 451(7181): 959-963.
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[57] Moore, RB, Obornik, M, Janouskovec, J, Chrudimsky, T, Vancova, M, Green, DH, Wright, SW, Davies, NW, Bolch, CJS, Heimann, K, Slapeta, J, Hoegh-Guldberg, O, Logsdon, JM and Carter, DA (2008). A photosynthetic alveolate closely related to apicomplexan parasites (vol 451, pg 959, 2008). Nature 452(7189): 900-900.
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[58] Munday, PL, Jones, GP, Pratchett, MS and Williams, AJ (2008). Climate change and the future for coral reef fishes. Fish and Fisheries 9: 261-285.
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[59] O'Leary, MJ, Hearty, PJ and McCulloch, MT (2008). U-series evidence for widespread reef development in shark bay during the last interglacial. Palaeogeography, Palaeoclimatology, Palaeoecology 259(4): 424-435.
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[60] Olsson, P, Folke, C and Hughes, TP (2008). Navigating the transition to ecosystem-based management of the great barrier reef, australia. Proceedings of the National Academy of Sciences 105(28): 9489-9494.
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[61] Ortiz, JO, Rodriguez-Lanetty, M and Bubis, J (2008). Purification and characterization of transducin from capybara hydrochoerus hydrochaeris. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 149(1): 22-28.
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[62] Page, C and Willis, B (2008). Epidemiology of skeletal eroding band on the great barrier reef and the role of injury in the initiation of this widespread coral disease. Coral Reefs 27(2): 257-272.
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[63] Pratchett, M, Berumen, M, Marnane, M, Eagle, J and Pratchett, D (2008). Habitat associations of juvenile versus adult butterflyfishes. Coral Reefs 27(3): 541-551.
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[64] Pratchett, MS, Munday, PL, Wilson, SK, Graham, NAJ, Cinner, JE, Bellwood, DR, Jones, GP, Polunin, NVC and McClanahan, TR (2008). Effects of climate induced coral bleaching on coral reef fishes; ecological and economic consequences. Oceanography and Marine Biology 46: 251-296.

[65] Purkis, S, Graham, N and Riegl, B (2008). Predictability of reef fish diversity and abundance using remote sensing data in diego garcia (chagos archipelago). Coral Reefs 27(1): 167-178.
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[66] Randall, JE and Munday, PL (2008). Vanderhorstia steelei, a new shrimpgoby from the society islands. Aqua 14(1): 35-41.
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[67] Renema, W, Bellwood, DR, Braga, JC, Bromfield, K, Hall, R, Johnson, KG, Lunt, P, Meyer, CP, McMonagle, LB, Morley, RJ, O'Dea, A, Todd, JA, Wesselingh, FP, Wilson, MEJ and Pandolfi, JM (2008). Hopping hotspots: Global shifts in marine biodiversity. Science 321(5889): 654-657.
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[68] Richards, Z (2008). Afterblast. Australasian Science Magazine 29(5): 16-18.
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[69] Richards, ZT, Beger, M, Pinca, S and Wallace, CC (2008). Bikini atoll coral biodiversity resilience five decades after nuclear testing. Marine Pollution Bulletin 56(3): 503-515.
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[70] Ridgway, T, Riginos, C, Davis, J and Hoegh-Guldberg, O (2008). Genetic connectivity patterns of pocillopora verrucosa in southern african marine protected areas. Marine Ecology Progress Series 354: 161-168.
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[71] Rodriguez-Ramirez, A, Bastidas, C, Rodriguez, S, Leao, Z, Kikuchi, R, Oliveira, M, Gil, D, Garzon-Ferreira, J, Reyes-Nivia, M, Navas-Camacho, R, Santodomingo, N, Diaz-Pulido, G, Venera-Ponton, D, Florez-Leiva, L, Rangel-Campo, A, Orozco, C, Marquez, J, Lopez-Victoria, M and Sanchez JA, H, MC (2008). The effects of coral bleaching in southern tropical america: Brazil, colombia, and venezuela. pp 105-114. In Status of caribbean coral reefs after bleaching and hurricanes in 2005. C. Wilkinson and D. Souter (Eds.). Global Coral Reef Monitoring Network, and Reef and Rainforest Research Centre, Townsville.
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[72] Roff, G, Kvennefors, E, Ulstrup, K, Fine, M and Hoegh-Guldberg, O (2008). Coral disease physiology: The impact of acroporid white syndrome on symbiodinium. Coral Reefs 27(2): 373-377.
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[73] Roff, G, Ulstrup, KE, Fine, M, Ralph, PJ and Hoegh-Guldberg, O (2008). Spatial heterogeneity of photosynthetic activity within diseased corals from the great barrier reef. Journal of Phycology 44(2): 526-538.
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[74] Russ, GR, Cheal, AJ, Dolman, AM, Emslie, MJ, Evans, RD, Miller, I, Sweatman, H and Williamson, DH (2008). Rapid increase in fish numbers follows creation of world's largest marine reserve network. Current Biology 18(12): R514-R515.
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[75] Sampayo, EM, Ridgway, T, Bongaerts, P and Hoegh-Guldberg, O (2008). Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type. Proceedings of the National Academy of Sciences 105(30): 10444-10449.
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[76] Scheffer, M, Nes, EHv, Holmgren, M and Hughes, T (2008). Pulse-driven loss of top-down control: The critical-rate hypothesis. Ecosystems 11: 226-237.
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[77] Schwarz, J, Brokstein, P, Voolstra, C, Terry, A, Miller, D, Szmant, A, Coffroth, M and Medina, M (2008). Coral life history and symbiosis: Functional genomic resources for two reef building caribbean corals, acropora palmata and montastraea faveolata. BMC Genomics 9(1): 97.
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[78] Selig, E, Harvell, C, Bruno, J, Willis, B, Page, C, Casey, K and Sweatman, H (2008). Analyzing the relationship between ocean temperature anomalies and coral disease outbreaks at broad spatial scales. pp 111-128. In Coral reefs and climate change. J. Phinney, O. Hoegh-Guldberg, J. Kleypas, W. Skirving and A. Strong (Eds.). American Geological Union

[79] Simpson, S, Jeffs, A, Montgomery, J, McCauley, R and Meekan, M (2008). Nocturnal relocation of adult and juvenile coral reef fishes in response to reef noise. Coral Reefs 27(1): 97-104.
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[80] Smith-Keune, C and Dove, S (2008). Gene expression of a green fluorescent protein homolog as a host-specific biomarker of heat stress within a reef-building coral. Marine Biotechnology 10(2): 166-180.
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[81] Sussman, M, Willis, BL, Victor, S and Bourne, DG (2008). Coral pathogens identified for white syndrome (ws) epizootics in the indo-pacific. PLoS ONE 3(6): e2393.
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[82] Wild, C, Jantzen, C, Struck, U, Hoegh-Guldberg, O and Huettel, M (2008). Biogeochemical responses following coral mass spawning on the great barrier reef: Pelagic-benthic coupling. Coral Reefs 27(1): 123-132.
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[83] Wong, MYL, Munday, PL, Buston, PM and Jones, GP (2008). Fasting or feasting in a fish social hierarchy. Current Biology 18(9): R372-R373.
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[84] Wong, MYL, Munday, PL, Buston, PM and Jones, GP (2008). Monogamy when there is potential for polygyny: Tests of multiple hypotheses in a group-living fish. Behavioral Ecology 19(2): 353-361.
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[85] Yellowlees, D and Leggat, W (2008). Heat shock. Australasian Science Magazine 29(4): 35-36.
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[86] Yellowlees, D, Rees, TAV and Leggat, W (2008). Metabolic interactions between algal symbionts and invertebrate hosts. Plant Cell and Environment 31: 679-694.
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